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| Registros recuperados : 569 | |
| 101. |  | AMARAL, A. C; KUNZ, A.; STEINMETZ, R. L. R.; SCUSSIATO, L. A.; TAPPARO, D. Anaerobic digestion of swine manure: stratified production units and its biogas potential. In: SIMPÓSIO INTERNACIONAL SOBRE GERENCIAMENTO DE RESÍDUOS AGROPECUÁRIOS E AGROINDUSTRIAIS, 4., 2015, Rio de Janeiro, RJ. Anais... Brasília: Embrapa, 2015.| Biblioteca(s): Embrapa Suínos e Aves. |
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| 103. | | XAVIER, R. de M.; CONCEIÇÃO, V.; BORSATO, A. V.; FEIDEN, A.; AMARAL, A. R. do. Apoio a processo de transição agroecológica: interação entre o científico e o tradicional. Cadernos de Agroecologia, v. 7, n.2, 2012. 5p. Também em SEMINÁRIO DE AGROECOLOGIA DE MATO GROSSO DO SUL, 4.; ENCONTRO DE PRODUTORES AGROECOLÓGICOS DE MS, 3., 2012, Glória de Dourados. O saber tradicional e o científico: a interação encurtando caminhos para o desenvolvimento...| Biblioteca(s): Embrapa Pantanal. |
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| 105. | | BAPTISTA, J. C.; HOMEM, R. A.; AMARAL, A. M. de; MACHADO, M. A. Análise funcional de dois operons do sistema de secreção tipo II em Xanthomonas axonopodis pv. citri. Summa Phytopathologica, Botucatu, v. 33, supl., p. S14, 2007. Resumo 021. Edição dos Anais do XXX Congresso Paulista de Fitopatologia, 2007, Jaboticabal.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 108. | | HOMEM, R. A.; BAPTISTA, J. C.; AMARAL, A. M. do; MACHADO, M. A. Análise mutacional de Xanthomonas axonopodis pv. citri para componentes do sistema de secreção tipo III. Summa Phytopathologica, Botucatu, v. 33, supl., p. S14, 2007. Resumo 020. Edição dos Anais do XXX Congresso Paulista de Fitopatologia, 2007, Jaboticabal.| Biblioteca(s): Embrapa Recursos Genéticos e Biotecnologia. |
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| 111. | | AMARAL, A. J. do; COGO, N. P.; BERTOL, I.; BARBOSA, F. T. Perdas de fósforo e potássio por erosão sob diferentes tipos e doses de resíduo cultural, em dois modos de semeadura direta. In: CONGRESSO BRASILEIRO DE CIÊNCIA DO SOLO, 33., 2011, Uberlândia. Solos nos biomas brasileiros: sustentabilidade e mudanças climáticas: anais. [Uberlândia]: SBCS: UFU, ICIAG, 2011. 1 CD-ROM.| Biblioteca(s): Embrapa Solos. |
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| 113. | | TÁPARRO, D. C.; VIANCELLI, A.; AMARAL, A. C.; FONGARO, G.; STEINMETZ, R. L. R.; KUNZ, A. Pathogens inactivation kinetics in co-digestion of swine manure and swine carcass. In: SIMPÓSIO INTERNACIONAL SOBRE GERENCIAMENTO DE RESÍDUOS AGROPECUÁRIOS E AGROINDUSTRIAIS, 5., 2017, Foz do Iguaçu, Anais... Concórdia: Sbera: Embrapa Suínos e Aves, 2017. SIGERA. p. 333-336.| Biblioteca(s): Embrapa Suínos e Aves. |
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| 116. | | AMARAL, A. C. do; KUNZ, A.; STEINMETZ, R. L. R.; JUSTI, K. C. Copper and zinc distribution in swine effluent during anaerobic treatment. In: SIMPÓSIO INTERNACIONAL SOBRE GERENCIAMENTO DE RESÍDUOS AGROPECUÁRIOS E AGROINDUSTRIAIS, 3., 2013, São Pedro, SP. Anais... São Pedro, SP: SBERA, 2013.| Biblioteca(s): Embrapa Suínos e Aves. |
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| 117. | | CONCEIÇÃO, V.; XAVIER, R. de M.; AMARAL, A. R.; BORSATO, A. V.; FEIDEN, A. Coquetel biológico (EM) no crescimento de mudas de Ocimum basilicum L. Cadernos de Agroecologia, v. 7, n.2, 2012. 5p. Também em: SEMINÁRIO DE AGROECOLOGIA DE MATO GROSSO DO SUL, 4.; ENCONTRO DE PRODUTORES AGROECOLÓGICOS DE MS, 3., 2012, Glória de Dourados. O saber tradicional e o científico: a interação encurtando caminhos para o desenvolvimento...| Biblioteca(s): Embrapa Pantanal. |
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| 118. | | AMARAL, A. M. do; PAIVA, L. V.; MARINHO, C. S.; MENEGUCCI, J. L. de P. Diagnose visual da Clorose Variegada dos Citros (CVC) em pomares na regiao de Lavras, sul de Minas. In: CONGRESSO DA POS-GRADUACAO NA ESAL, 6., 1993, Lavras. Anais: Cerrado: torto, nem por isso errado. Lavras: ESAL, 1993. p.191-192.| Biblioteca(s): Embrapa Cerrados. |
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| 119. | | CAMARA, T. M. M.; AMARAL, A. L. do; MORAIS, L. K. de. Diversidade entre acessos do complexo Saccharum estimada por meio de caracteres agronômicos. Revista RG News, Brasília, DF, v. 3, n. 2, 2017. p. 120. Edição Especial dos Anais do 3° Simpósio da Rede de Recursos Genéticos Vegetais do Nordeste, Aracaju, out. 2017.| Biblioteca(s): Embrapa Tabuleiros Costeiros. |
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| 120. | | AMARAL, A. L. do; CAMARA, T. M. M.; MORAIS, L. K. de. Documentação do banco de germoplasma do complexo Saccharum. Revista RG News, Brasília, DF, v. 3, n. 2, 2017. p.131. Edição Especial dos Anais do 3° Simpósio da Rede de Recursos Genéticos Vegetais do Nordeste, Aracaju, out. 2017.| Biblioteca(s): Embrapa Tabuleiros Costeiros. |
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| Registros recuperados : 569 | |
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 | Acesso ao texto completo restrito à biblioteca da Embrapa Suínos e Aves. Para informações adicionais entre em contato com cnpsa.biblioteca@embrapa.br. |
Registro Completo
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Biblioteca(s): |
Embrapa Suínos e Aves. |
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Data corrente: |
31/08/2021 |
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Data da última atualização: |
31/08/2021 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Circulação/Nível: |
A - 1 |
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Autoria: |
SERIBELLI, A. A.; SILVA, P. da; FRAZÃO, M. R.; KICH, J. D.; ALLARD, M. W.; FALCÃO, J. P. |
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Afiliação: |
AMANDA APARECIDA SERIBELLI, USP; PATRICK DA SILVA, UNESP; MILIANE RODRIGUES FRAZÃO, USP; JALUSA DEON KICH, CNPSA; MARC W. ALLARD, Food and Drug Administration; JULIANA PFRIMER FALCÃO, USP. |
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Título: |
Phylogenetic relationship and genomic characterization of Salmonella Typhimurium strains isolated from swine in Brazil. |
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Ano de publicação: |
2021 |
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Fonte/Imprenta: |
Infection, Genetics and Evolution, v. 92, n. 104977, 2021. |
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DOI: |
https://doi.org/10.1016/j.meegid.2021.104977 |
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Idioma: |
Inglês |
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Conteúdo: |
Abstract: Salmonella Typhimurium has been transmitted between humans and animals. Although, Brazil has been one of the largest pork meat exporters worldwide, there are few studies that characterized epidemiologically S. Typhimurium strains from swine. The aims of this work were to study the phylogenetic relationship of S. Typhimurium genomes isolated from swine in Brazil among themselves and with other genomes isolated from several sources and countries using wgMLST and cgMLST and to perform the search of Salmonella pathogenicity islands (SPIs). In addition, for S. Typhimurium strains from swine to compare the virulence and antimicrobial resistance genes by VFDB and ResFinder, genetic content by BLAST Atlas and orthologous proteins clusters by OrthoVenn. The constructed phylogenetic trees by wgMLST and cgMLST grouped the majority (92.3% and 80.7%, respectively) of the strains isolated from swine in Brazil into the same group. All the isolates contained important SPIs (SPI-1, SPI-2, SPI-3, SPI-5 and SPI-9). A total of 100 and 31 virulence and resistance genes were detected in the S. Typhimurium strains isolated from swine, respectively. The BLAST Atlas and orthologous proteins analysis found regions of phages and differences in metabolic, regulatory and cellular processes among S. Typhimurium LT2 and S. Typhimurium isolates from swine. In conclusion, molecular typing based in the wgMLST and cgMLST suggested that the S. Typhimurium isolates from swine studied were genetically related. The pathogenic potential of the strains studied was corroborated by the presence of important SPIs and virulence genes. The high number of antimicrobial resistance genes detected is worrying and reinforced their potential risk in swine in Brazil. The comparison by BLAST Atlas suggested differences in mobile genetic elements among S. Typhimurium LT2 and S. Typhimurium isolates from swine in Brazil. The orthologous proteins analysis revealed unique genes related to important cellular processes in the strains from swine. MenosAbstract: Salmonella Typhimurium has been transmitted between humans and animals. Although, Brazil has been one of the largest pork meat exporters worldwide, there are few studies that characterized epidemiologically S. Typhimurium strains from swine. The aims of this work were to study the phylogenetic relationship of S. Typhimurium genomes isolated from swine in Brazil among themselves and with other genomes isolated from several sources and countries using wgMLST and cgMLST and to perform the search of Salmonella pathogenicity islands (SPIs). In addition, for S. Typhimurium strains from swine to compare the virulence and antimicrobial resistance genes by VFDB and ResFinder, genetic content by BLAST Atlas and orthologous proteins clusters by OrthoVenn. The constructed phylogenetic trees by wgMLST and cgMLST grouped the majority (92.3% and 80.7%, respectively) of the strains isolated from swine in Brazil into the same group. All the isolates contained important SPIs (SPI-1, SPI-2, SPI-3, SPI-5 and SPI-9). A total of 100 and 31 virulence and resistance genes were detected in the S. Typhimurium strains isolated from swine, respectively. The BLAST Atlas and orthologous proteins analysis found regions of phages and differences in metabolic, regulatory and cellular processes among S. Typhimurium LT2 and S. Typhimurium isolates from swine. In conclusion, molecular typing based in the wgMLST and cgMLST suggested that the S. Typhimurium isolates from swine studied were genetically ... Mostrar Tudo |
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Palavras-Chave: |
Análises filogenéticas; BLAST Atlas; Genes de virulência e resistência; Orthologous proteins; Phylogenetic analyses; Proteínas ortólogas; Relação filogenética; SPIs; Virulence and resistance genes. |
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Thesagro: |
Salmonella Typhimurium; Suíno. |
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Categoria do assunto: |
-- |
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Marc: |
LEADER 03077naa a2200325 a 4500
001 2133959
005 2021-08-31
008 2021 bl uuuu u00u1 u #d
024 7 $ahttps://doi.org/10.1016/j.meegid.2021.104977$2DOI
100 1 $aSERIBELLI, A. A.
245 $aPhylogenetic relationship and genomic characterization of Salmonella Typhimurium strains isolated from swine in Brazil.$h[electronic resource]
260 $c2021
520 $aAbstract: Salmonella Typhimurium has been transmitted between humans and animals. Although, Brazil has been one of the largest pork meat exporters worldwide, there are few studies that characterized epidemiologically S. Typhimurium strains from swine. The aims of this work were to study the phylogenetic relationship of S. Typhimurium genomes isolated from swine in Brazil among themselves and with other genomes isolated from several sources and countries using wgMLST and cgMLST and to perform the search of Salmonella pathogenicity islands (SPIs). In addition, for S. Typhimurium strains from swine to compare the virulence and antimicrobial resistance genes by VFDB and ResFinder, genetic content by BLAST Atlas and orthologous proteins clusters by OrthoVenn. The constructed phylogenetic trees by wgMLST and cgMLST grouped the majority (92.3% and 80.7%, respectively) of the strains isolated from swine in Brazil into the same group. All the isolates contained important SPIs (SPI-1, SPI-2, SPI-3, SPI-5 and SPI-9). A total of 100 and 31 virulence and resistance genes were detected in the S. Typhimurium strains isolated from swine, respectively. The BLAST Atlas and orthologous proteins analysis found regions of phages and differences in metabolic, regulatory and cellular processes among S. Typhimurium LT2 and S. Typhimurium isolates from swine. In conclusion, molecular typing based in the wgMLST and cgMLST suggested that the S. Typhimurium isolates from swine studied were genetically related. The pathogenic potential of the strains studied was corroborated by the presence of important SPIs and virulence genes. The high number of antimicrobial resistance genes detected is worrying and reinforced their potential risk in swine in Brazil. The comparison by BLAST Atlas suggested differences in mobile genetic elements among S. Typhimurium LT2 and S. Typhimurium isolates from swine in Brazil. The orthologous proteins analysis revealed unique genes related to important cellular processes in the strains from swine.
650 $aSalmonella Typhimurium
650 $aSuíno
653 $aAnálises filogenéticas
653 $aBLAST Atlas
653 $aGenes de virulência e resistência
653 $aOrthologous proteins
653 $aPhylogenetic analyses
653 $aProteínas ortólogas
653 $aRelação filogenética
653 $aSPIs
653 $aVirulence and resistance genes
700 1 $aSILVA, P. da
700 1 $aFRAZÃO, M. R.
700 1 $aKICH, J. D.
700 1 $aALLARD, M. W.
700 1 $aFALCÃO, J. P.
773 $tInfection, Genetics and Evolution$gv. 92, n. 104977, 2021.
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